Insertion junction: CLIP2.034028_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034028
Chromosome:chromosome 1
Location:4361050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029600 (1 of 3) 1.11.2.3 - Plant seed peroxygenase / Soybean peroxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGCAACCGGTGCCGGAGGCTGAATGCGGCGTGCGTCGCATCCCGCA
Internal bar code:TGTCGCCAAAATGGGATTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCGGGAGTGAGTGATCG
Suggested primer 2:CGCACACAGCTCTACACAGA