Insertion junction: CLIP2.034033_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034033
Chromosome:chromosome 3
Location:931445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146627 (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTATGTGCACGCCAACTGAACATTGCCAACCACCCCCTTCACGGCTCC
Internal bar code:GAGGTTGAATGGCCAACTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:848
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCTTTCCCTTTGTGCG
Suggested primer 2:GACGAAGAGGCTAAGGGACG