Insertion junction: CLIP2.034044_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034044
Chromosome:chromosome 10
Location:274146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419550 (1 of 1) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTG
Internal bar code:ATATTGGCGGAGGATCCGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5735
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCGTAGTATGCGTGTCC
Suggested primer 2:AATCCCTACCCTCTCCCACC