Insertion junction: CLIP2.034045_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034045
Chromosome:chromosome 10
Location:1284166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426900 (1 of 3) PF02458 - Transferase family (Transferase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAGTGGGGTGGAAGGGGCGGCGAGGGGAGAAGAGGAGCGGAGAGGG
Internal bar code:GCCTAGGGGTTGGGGTCTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGACGTGTGTGCTCAG
Suggested primer 2:GCACCTTGTCCTGCACAATG