Insertion junction: CLIP2.034047_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034047
Chromosome:chromosome 6
Location:1856282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263800 SEE2 Putative splicing endonuclease positive effector; (1 of 1) PTHR10887:SF369 - DNA2/NAM7 HELICASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTGCTGTCACCTCTGGGCCCATAAGAACCAGCAGCTGCCTTGGCCC
Internal bar code:AGATGGTTGGTTGCAAGCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACTGTAGCTTAGCGGG
Suggested primer 2:GTAACCACACACGCACACAC