Insertion junction: CLIP2.034047_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034047
Chromosome:chromosome 6
Location:1856294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263800 SEE2 Putative splicing endonuclease positive effector; (1 of 1) PTHR10887:SF369 - DNA2/NAM7 HELICASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGCAGGGAAATGGTGTGGGACCCCTGTGCCGCTGGCGGGTGCCAGGC
Internal bar code:GGAGATGGTGGGGATGCTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCACACACGCACACAC
Suggested primer 2:CCGTACTGTAGCTTAGCGGG