Insertion junction: CLIP2.034056_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034056
Chromosome:chromosome 12
Location:4365498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801409 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTTGCGCTGTCACTTCGGGAAAGTATGGGGATGGCTATGGGTTTCCT
Internal bar code:TACTTGTACAGGTACTAAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3472
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTATCAGGGCCCAACTTG
Suggested primer 2:CCATCCTGCTCACTGCCTAC