Insertion junction: CLIP2.034059_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034059
Chromosome:chromosome 17
Location:2627237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716600 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTGAGTAAGTGCATGTCGCATAACGAAATGGAACAAGCCCGCGGACC
Internal bar code:GTACATCTGGGCTCATTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTTGGCTCTCTGTGCTG
Suggested primer 2:TTTGGAGGTGGTACGACAGC