Insertion junction: CLIP2.034069_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034069
Chromosome:chromosome 14
Location:1421613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617100 SRS9,SRS12 Serine/arginine-rich pre-mRNA splicing factor; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTTACGAATTCTTGTAACTCCGCGCACGCGCAGGTCGCGCTCCCGC
Internal bar code:GCGTCAGGCTGGGGTATCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4485
LEAP-Seq percent confirming:91.7526
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAATGCTGCATTACGG
Suggested primer 2:CAATGGGTTGTGCGCGATAG