Insertion junction: CLIP2.034072_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034072
Chromosome:chromosome 6
Location:3864270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278183 (1 of 1) PTHR23054//PTHR23054:SF14 - UNCHARACTERIZED // PROTEIN Y45F10A.7, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTGTACGAGACGCGGATCTGTGGCCCGCCCGCCGCCGCCGCCGCCA
Internal bar code:ATCTATGCATGGGGACCATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTCCAGGGATGAAGTTG
Suggested primer 2:AGTGTGACAAACAGGGGCAA