Insertion junction: CLIP2.034078_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034078
Chromosome:chromosome 7
Location:814208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318250 HLM12 (1 of 2) IPR001214//IPR019734 - SET domain // Tetratricopeptide repeat; Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCAGGGCCAGTGCCGCCGGCTCCACCACTGCTAGCGCGTCCTCAAAT
Internal bar code:CAGGGAATTGGGACTACTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:44.1176
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGGTGAAGCAGTGTGGT
Suggested primer 2:GCTCCCCTTACTTGTTCGCT