Insertion junction: CLIP2.034086_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034086
Chromosome:chromosome 10
Location:4710824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452300 (1 of 4) 2.1.1.62 - mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACGCACAAACATGGCGGGAGCGCAGGGTAGAGGGGCGACCACCA
Internal bar code:GCTTATTAGTAATTGGTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1715
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTCTAGACAGCCAGCG
Suggested primer 2:CTAGACAGCGTCCATCGTCC