Insertion junction: CLIP2.034089_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034089
Chromosome:chromosome 17
Location:3632710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725376 (1 of 1) IPR000104//IPR001859//IPR009148 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like // Streptococcal non-M secreted SibA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCCGCCTCGTCTAACACAATGGAACATCACCAACGGCTGCCACGACA
Internal bar code:CTCGTGCAGATCAGATGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:74.1936
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCATTCCCTGGAGAGCT
Suggested primer 2:ACAGCCGCTGTGTTGTCATA