Insertion junction: CLIP2.034090_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034090
Chromosome:chromosome 12
Location:6661370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110460

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATACAACAAGAGTTAAGAGTGCTTGTACGCTGACTATGGCGCCCTGA
Internal bar code:CAGACTAGGGTACTAGTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2679
LEAP-Seq percent confirming:93.4426
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTGCTGGCTCGCTATC
Suggested primer 2:GGGGGATCTGTGCATGTTGA