Insertion junction: CLIP2.034091_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034091
Chromosome:chromosome 4
Location:1174621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGAAGAGGGCTTCCGGTCAGGTTGGGCGGGGCTTAGATGCCCAAGTT
Internal bar code:AAGGGGGGAGCGTTAATCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2701
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCAAGAGTCCCAACCAG
Suggested primer 2:CTGGTGGGTGGGAGGAGATA