Insertion junction: CLIP2.034097_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034097
Chromosome:chromosome 6
Location:5531038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286750 (1 of 2) PF15247 - Histone RNA hairpin-binding protein RNA-binding domain (SLBP_RNA_bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAATGTGCATAGCAACATTCCAAAGCACCGAGACGCACCGTGGCACGA
Internal bar code:ATTATTCGCCATAGAACCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2396
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAAACCGCACCAAATGG
Suggested primer 2:GCTTGTTCCTGCATGCAACA