Insertion junction: CLIP2.034100_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034100
Chromosome:chromosome 17
Location:485095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGTGGCGCCGTCGGCCCCGAGCCTGCTTGAGCCGCCTGCACATGCC
Internal bar code:ACACCGAAGTGTGTAGGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:229
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAAGTTGTCCAAGTGTG
Suggested primer 2:GAGGAGGAGGAGAATGGGGT