Insertion junction: CLIP2.034101_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034101
Chromosome:chromosome 14
Location:2002755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620951 (1 of 1) PTHR21496//PTHR21496:SF8 - FERREDOXIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACTGGTCTGGCAGCTCCAGTGCTGAGAACCGCACCACCGTGTCTGCA
Internal bar code:CGCGGACAGTAGGAGACTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3411
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTTGCACAACCTGGTGG
Suggested primer 2:ATGGGCATGGTCCAGATTGG