Insertion junction: CLIP2.034104_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034104
Chromosome:chromosome 4
Location:2261275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACAAGACTCCTTAAGTACCAGTCTCTAGTATTGTGACATAGAACGAT
Internal bar code:GTCGCGCGGCTTATGCATACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCAGTTCGCCGAGGATC
Suggested primer 2:ACTTGCGGTTTGGGACCTAG