Insertion junction: CLIP2.034111_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034111
Chromosome:chromosome 1
Location:5886096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800103 (1 of 1) PF09749 - Uncharacterised conserved protein (HVSL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCACCCCACGGCCCCGGTCTCACCTTGCGATACAGCGCATCCAGTGC
Internal bar code:TCTAGCTTTAGTATGCGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:586
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGATCCAGATCCAGGCT
Suggested primer 2:AGCTAGGGTCAGGGGTAGTG