Insertion junction: CLIP2.034112_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034112
Chromosome:chromosome 16
Location:2824895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801920 (1 of 2) K14411 - RNA-binding protein Musashi (MSI) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCACCGCTTCCCCACCTCCCACGTTGCCCACCTCCATACAGGCTCGG
Internal bar code:TACAAATGCAATTAGGAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2690
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGAAGCTAAGGCCAGA
Suggested primer 2:AGAAGGTCATGGCCGTCAAG