Insertion junction: CLIP2.034121_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034121
Chromosome:chromosome 3
Location:5270959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182350 (1 of 1) K13176 - THO complex subunit 7 (THOC7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAAGCGAGCAGATGATTGGGCATGGGAACAGATTCACAGGCCCTTGG
Internal bar code:TGGGCGGGGCCTACGTGGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2935
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCTCTGCACGCTTGTAA
Suggested primer 2:ATTGTCCTACCCGCCTACCT