Insertion junction: CLIP2.034123_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034123
Chromosome:chromosome 5
Location:3136222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755947 GT90F50,GT90-50 GT90 family protein 50; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGCACGTTGACCCGGTGCCTCAGCAGCCTGTGTGCGTGTGTGTGTG
Internal bar code:TGGGAGGAAACGAGTATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1645
LEAP-Seq percent confirming:74.2857
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTTGCTTGCTCTTCTCA
Suggested primer 2:CGTGGCTACATAGGACGCAT