Insertion junction: CLIP2.034128_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034128
Chromosome:chromosome 17
Location:2085487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711401 (1 of 10) IPR006593 - Cytochrome b561/ferric reductase transmembrane intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAAAGTGGATTTGGAGTCCTCTCGTCAAGCTCTTTCGTTTTAGAACA
Internal bar code:ATCCTGTGAACTTTATTATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1310
LEAP-Seq percent confirming:27.0833
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAAGGGGTCATCATGCC
Suggested primer 2:TGTGCCGGAAGAGATTGGTC