Insertion junction: CLIP2.034137_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034137
Chromosome:chromosome 16
Location:2381817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659500 (1 of 3) 2.4.1.228 - Lactosylceramide 4-alpha-galactosyltransferase / Histo-blood group P(k) UDP-galactose CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATTATGGCCTGAAAGGCCAGCTGGACAATCATGATACAAGTGGGCGT
Internal bar code:ATAGGTAAATATCCGACGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2030
LEAP-Seq percent confirming:98.6667
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGACTTGCGTGTCGTAA
Suggested primer 2:CAACATTTGCGAGCGGTCAA