Insertion junction: CLIP2.034141_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034141
Chromosome:chromosome 12
Location:1940571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511640 PIGX,PIGX1 (1 of 1) PF08320 - PIG-X / PBN1 (PIG-X); co-factor of alpha-(1-4)-Mannosyltransferase, PIG-X CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGATACAACTGCACCTCTTCTTTGGCTCCTGGCCGCTGTGTCAGCG
Internal bar code:CAGTGCGATTTTCGCTCTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCCAGTCATACGCTAGG
Suggested primer 2:TGATCCACTCCGAAGCCCTA