Insertion junction: CLIP2.034142_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034142
Chromosome:chromosome 9
Location:3017453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393617 (1 of 21) IPR000679 - Zinc finger, GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAATGCACCTCTGTCCGCCGCGCCTCTGAAATCCTCTCCTTCCGTTGC
Internal bar code:TATTTTCAGTAGCAGTACGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3082
LEAP-Seq percent confirming:87.037
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACTCCACACATGCTGGT
Suggested primer 2:CTTGCTCCTCCTGTTCCTGG