Insertion junction: CLIP2.034144_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034144
Chromosome:chromosome 2
Location:5379928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800236 (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTCTCCCATCTTCACAAGCAGGTTCATGGCCCACACACCTCGAAGT
Internal bar code:TTCCAAATACCAACTCTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:ATACACACGGGCACACTGAG
Suggested primer 2:TTCTCCCTCCCCTCCTTAGC