Insertion junction: CLIP2.034150_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034150
Chromosome:chromosome 1
Location:7170051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051350 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCAGGCACAATCAGTCTCTGTAGTGAAACCGGAACCACAAACTAAG
Internal bar code:GTTATCTGTACAGGGAGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5400
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCTGGCAGCAGTAGTA
Suggested primer 2:TGTATTTGAGTCCCCGTGCC