Insertion junction: CLIP2.034153_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034153
Chromosome:chromosome 4
Location:2335006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220900 GT90-4,GT90F4 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAAACGGCACGTAGTGAACCCAGGGCTGCAGAGACCTATAGTTTGGG
Internal bar code:ACGGCCTAAGGGATAGATCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3697
LEAP-Seq percent confirming:87.234
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCGATTTGAATCCCAG
Suggested primer 2:ACACACACACACACAAGGGT