Insertion junction: CLIP2.034166_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034166
Chromosome:chromosome 12
Location:8688739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547800 SNE15 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; NAD dependent epimerase/dehydratase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTTTCATGGTGGGGGCACCGCATACTCCACACGCATGTCAAAGGGG
Internal bar code:GGACATACACAGTGCGGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTTTCGGTCGTACACGC
Suggested primer 2:CCCTTGACCATGGGCTCAAT