Insertion junction: CLIP2.034172_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034172
Chromosome:chromosome 10
Location:1386055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427850 (1 of 1) IPR000014//IPR000104//IPR013767 - PAS domain // Antifreeze protein, type I // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCCTTCCGGAACTCGTGGCTCCTCTGTGGGGCAAACGAGCAAGGAAA
Internal bar code:CTTTGTGACAAAAATTTCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2654
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGACCCCTACTTTCACC
Suggested primer 2:GCACACGACATCGCATACAC