Insertion junction: CLIP2.034173_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034173
Chromosome:chromosome 17
Location:1976673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710351 (1 of 10) PTHR12270//PTHR12270:SF6 - GLYCOSYLTRANSFERASE-RELATED // GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTTGGCGCGGACGGTCGTGTGGCTTGCGTTGCTTGCTGCAGGCGCGT
Internal bar code:GTTTTCATTCTGGACTCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAAGCGATTGGGGGAGT
Suggested primer 2:TTGGAGGCTTCAGCAGTCAG