Insertion junction: CLIP2.034179_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034179
Chromosome:chromosome 7
Location:2675554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330800 OPR30 OctotricoPeptide Repeat protein 30 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGGGTGAGGCTGCGGCCTCATCAGGGTGGGTGGGTTAGTTTAATAC
Internal bar code:ATTGTACACGTCTGATTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1025
LEAP-Seq percent confirming:27.027
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGTACAGCTGTGACAGG
Suggested primer 2:GGATCCATGGACCTGCAGAG