Insertion junction: CLIP2.034180_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034180
Chromosome:chromosome 2
Location:6704777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387319 (1 of 2) PTHR11082//PTHR11082:SF25 - TRNA-DIHYDROURIDINE SYNTHASE // TRNA-DIHYDROURIDINE SYNTHASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCGCGTGGCGGCGGCTCAGCGCTGCCGCTGCGGCCGCGCCTGTTTG
Internal bar code:CTCACATGATGTTCGTTACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCGGAACTTGACGGTCA
Suggested primer 2:GACTCCTGCACTGTCAACCA