Insertion junction: CLIP2.034181_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034181
Chromosome:chromosome 7
Location:2990758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333400 MMP23 Matrix metalloproteinase; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATTGGAAAAGCGAGCCCCAGCCAGAAGCGCCAAGACCCGTCCTGAC
Internal bar code:ACAAGTTGTTCGATTCTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5941
LEAP-Seq percent confirming:93.4426
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGGAGTTGTCACGAGCA
Suggested primer 2:CCAAATCCCGCCCACTAAGT