Insertion junction: CLIP2.034191_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034191
Chromosome:chromosome 4
Location:1463300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214000 (1 of 1) PTHR19331//PTHR27000 - LYSYL OXIDASE-RELATED // FAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGAAGGGGCGGCGGCGGCGCAAAGGGCGGCGCTGACGCGGCCACA
Internal bar code:TGGCAGTGGCAGGAACCCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGAAGAAGGGCGAGGG
Suggested primer 2:GGGTACGTATCGCGCAGTAA