Insertion junction: CLIP2.034192_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034192
Chromosome:chromosome 16
Location:4460748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667900 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; ANT-subfamily ortholog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGATTCGGGTCGGCATCTGGGTCCGCATCACGGTCCGCCGCCGCATC
Internal bar code:ACTGCAGCATCTTATCATTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCTCGTTTTAGCTTGGT
Suggested primer 2:GAGTCCGGTGAAGGTGATGG