Insertion junction: CLIP2.034193_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034193
Chromosome:chromosome 17
Location:5308241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802111 (1 of 20) PF01822 - WSC domain (WSC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTACTATCTGTCCCTAAAAGCCTTCCTTAAAGATGGACACAGTGAGT
Internal bar code:TATTTGGTAAGGCCCACAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1564
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCACGATTAGGCCCTT
Suggested primer 2:TCTCCCTTGTTGACGCTCAC