Insertion junction: CLIP2.034194_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034194
Chromosome:chromosome 3
Location:638362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145607 BET3 (1 of 1) IPR016721 - Bet3-like protein; Component of TRAPP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCACTGCCATGGCCTCGCATTACCGAACGAGCCTGCACCCCCCCTCCC
Internal bar code:GACTGTGCTGTTAGTTCTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCATACCCAGACCGCACATA
Suggested primer 2:GCCGTTACAACCAACCAACC