Insertion junction: CLIP2.034202_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034202
Chromosome:chromosome 4
Location:3851761
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230046 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCCACCCCCTCGGTCGTCGTCGGGGAGACCTCTGGGGAGGAACCTGC
Internal bar code:ATGTAGATTTGGGCTCTCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2944
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGACACAGCACCATGTTG
Suggested primer 2:GACGGGTGTTTTAGGAGGGG