Insertion junction: CLIP2.034204_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034204
Chromosome:chromosome 10
Location:6048644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461750 DMC5 Putative DNA methylase; (1 of 1) PF00145//PF12047 - C-5 cytosine-specific DNA methylase (DNA_methylase) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGTGGAATGTCGCCGCGGCCCCCATTATTCGTGATATGCGCAGAGCTC
Internal bar code:GCAATAGTGAACCGTCGATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACTGCAACAAAAAGCGA
Suggested primer 2:TGGCTTGGTCTGGTTTGGTT