Insertion junction: CLIP2.034220_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034220
Chromosome:chromosome 3
Location:4665100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCCCGCGAGGGTCCAGGTGCTCTGTGTGCTGCTGCGCATAGCGGCT
Internal bar code:GGCCAACTATTGAGTGGTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1632
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGGATGCTGTGTACGT
Suggested primer 2:GACTCATCAGCTACCGCTCC