Insertion junction: CLIP2.034224_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034224
Chromosome:chromosome 9
Location:2564478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392653 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCGGTCTCGTTGTCGTAGCTGGGGGCCAGGGGCTGCCGCTGCCGTT
Internal bar code:CAAAAATGGTGGTTCTAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3345
LEAP-Seq percent confirming:79.0698
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCATCCATGCATACGTA
Suggested primer 2:CTACATGCGGCGGAAACATG