Insertion junction: CLIP2.034226_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034226
Chromosome:chromosome 6
Location:2680760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270600 CDS
lncRNA_TCONS_00027197 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGGCGCCGACCGCGGCTCAGCCACCCCAGAAGCTTGCGATCACAG
Internal bar code:TCGCCGGGTAGAGGGAGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AATTCCCAAGTCCGCACCAT
Suggested primer 2:GGAGGACTTCTGCGACAACA