Insertion junction: CLIP2.034239_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034239
Chromosome:chromosome 12
Location:730014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492750 (1 of 5) 3.2.1.1 - Alpha-amylase / Glycogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGATCGAGAACCTCCGCGGCGCGGCGCAGCAGCAGGTGGCCGCGGCC
Internal bar code:ATTCATGTCCAGCTTTCTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCAGACGCTCAACACC
Suggested primer 2:TTGCATGGTCCCGTTCGTAA