Insertion junction: CLIP2.034246_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034246
Chromosome:chromosome 16
Location:2216970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658200 (1 of 2) IPR003594//IPR024975 - Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTCCCTCGCCTTCGACCTCAGCTGTGCACACGACATCGCCACAGCCG
Internal bar code:CGTTACATGAAAATGCTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:867
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGTTCCAGCTACTGCC
Suggested primer 2:AGTTACGACAGTGGCAGTGG