Insertion junction: CLIP2.034250_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034250
Chromosome:chromosome 2
Location:5035114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111000 RRA1,CGL9 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACGTGCTTGGAAACCAACATCATTCCCACCTGACGGTCCTGAACAG
Internal bar code:CGTATGATTATAGCTGATGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:90.1639
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGCTTTAAGTGACGGCT
Suggested primer 2:AAGTTACCTTGGATGCCCGG