Insertion junction: CLIP2.034252_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034252
Chromosome:chromosome 1
Location:5111590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACTCGTGCGGCCGATCAGCCCAGGCGGGCCCGCCGGAGGCCGTGACG
Internal bar code:TGATCACATGAGGATTTTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1434
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGTCTTTCCTTTCTGGC
Suggested primer 2:GCAACACACACCGTCTCAAC