Insertion junction: CLIP2.034262_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034262
Chromosome:chromosome 7
Location:4728895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345400 FAP70 Flagellar Associated Protein 70; (1 of 1) PTHR23083//PTHR23083:SF418 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCGCGGCGAGCTCCAGCGCGAGTGCGGCCTCGGCGGGCAGCGCCAGC
Internal bar code:ACTATGATTACTATTGCGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAACACTCACTCGCACCT
Suggested primer 2:AAAGACTTGCGTTGTCGTGC